PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_019613-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 353aa    MW: 37476.7 Da    PI: 8.6651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_019613-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-12287332655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR ri +++ +L+el+P+     +k  + a++L +Av++Ik Lq
  NNU_019613-RA 287 SIAERERRTRISEKLKKLQELVPNM----DKQTNTADMLDLAVQHIKGLQ 332
                    689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.469281331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-15284346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.55E-13285336No hitNo description
Gene3DG3DSA:4.10.280.106.3E-15286345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-13287337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9287332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MFPSPNRPLG PPSNLTRYGS APGSLITSVV NSVVGGSEQE FSAAVGSETL MGRYFSGDSS  60
SLTTESSCKA NNVASETKDA AYRSERAATS SGLERSYGLN EIAVGDLAAV SNLRASGSSP  120
LIRHSSSPAG FLNHLMADNG FSISRGIGSY SSQSGTNSSH GMANGRLKSQ LSFTRQDSLS  180
QISEVGESVV GGCSSDDGTG KVGHSYGSGT FTMGSWDDTN SIVFSSSSKR AKTINGDIVT  240
SISGIDPQFS LPRNIEMATV EKLLQLQQDS VPCKIRAKRG CATHPRSIAE RERRTRISEK  300
LKKLQELVPN MDKQTNTADM LDLAVQHIKG LQNQVQKLNK DLENCNCGCK KST
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275943.10.0PREDICTED: transcription factor bHLH128-like
SwissprotQ8H1024e-91BH128_ARATH; Transcription factor bHLH128
TrEMBLF6I3R91e-135F6I3R9_VITVI; Putative uncharacterized protein
STRINGVIT_05s0124g00240.t011e-134(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.19e-82bHLH family protein